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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015873181.1_cds_XP_016435048.1_31048
CDS Infomation

[gene=LOC107761331] [db_xref=GeneID:107761331] [protein=homogentisate phytyltransferase 1, chloroplastic-like isoform X2] [protein_id=XP_016435048.1] [location=complement(join(87679..87720,88785..88889,89945..90040,90136..90207,101170..101265,101708..101809,103865..103954,104905..104988,105570..105644,105726..105809,106217..106503,107513..107588))] [gbkey=CDS]
Sequence

ATGGAATCTTTGCTTATTGGGTCGTTTCAGAGACCATCCGTTCCACTTGCAGCAGAGTTC
TCTCCACTCAAAACCAGTTCACGCACAATAGTACGAGTTTTGAAGTGTAAAGCATGGAAG
AGACCAGGAAAGTGTGATTCCACTTCTATGAAGTTGCAAAGGCAGTATATGACGCAAGAG
CTTGTTGGAGGCAGTGATGGAAGCATTATTCCCACTGATCGAAAACTTACAAAGAGGTTT
TTGGTGCATGCATCCTCTGAACATCCTCTTGAATCTCAACCTTCAAAGAGTCCATGGAAC
TCAGTGCATGATGCAGTGGATGCTTTCTACAGGTTCTCGCGGCCCCATACCGTAATAGGA
ACAGCATTGAGCATAATTTCAGTTTCTCTCCTTGCAGTTGAGAAGTTCTCTGATTTCTCT
CCATTATTTTTTACCGGGATGTTAGAGGCCATTGTTGCTGCCCTATTCATGAATATTTAC
ATAGTTGGTTTAAACCAGTTGTCTGATATCGAAATAGACAAGGTAAACAAGCCATATCTT
CCATTGGCATCAGGGGAATACTCTTTGCAGACTGGAGTAATTATCGTGTTGTCTTTCGCC
ATTCTGAGTTTTTGGCTTGGATGGATCGTTGGTTCCTGGCCTTTATTTTGGGCTCTATTC
ATCAGTTTTGTACTGGGAACGGCCTACTCAATCAATCTGCCACTTTTGAGATGGAAGAGA
TTTGCCTTGGTTGCTGCAATGTGCATCTTTGCTGTACGAGCAGTGATAGTTCAGATAGCC
TTTTATTTGCATATTCAGACTTATGTGTACAGAAGACCAGCTGTCCTTTCAAGACCTTTG
ATATTTGCAACAGCATTCATGAGCTTTTTCTCCGTTGTTATAGCATTATTCAAGGACATA
CCTGATATTGTTGGTGACAAGATTTTCGGAATTCAATCTTTTACTGTTCGCTTGGGTCAA
GAGAAGGTCTTTTGGATTTGTATTTCTCTTCTCGAAATGGCTTATCTTGTTGCCATCGTA
GTGGGTGCAACTTCTTCCAACATCTGGAGCAAATATTTTACTGTTGTTGGTCATGCTGCT
TTGGCTCTTTTACTTTGGACTCGAGCCAAATCAATTGACTTCAGTAGAAAAGCGGCAATA
ACATCTTTTTACATGTTCATATGGAAGCTTTTCTATGCAGAGTATTTGCTCATACCACTT
GTGAGGTGA

Peptide Sequence

PEP ID

XP_016435048.1
PEP Infomation

PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MESLLIGSFQRPSVPLAAEFSPLKTSSRTIVRVLKCKAWKRPGKCDSTSMKLQRQYMTQE
LVGGSDGSIIPTDRKLTKRFLVHASSEHPLESQPSKSPWNSVHDAVDAFYRFSRPHTVIG
TALSIISVSLLAVEKFSDFSPLFFTGMLEAIVAALFMNIYIVGLNQLSDIEIDKVNKPYL
PLASGEYSLQTGVIIVLSFAILSFWLGWIVGSWPLFWALFISFVLGTAYSINLPLLRWKR
FALVAAMCIFAVRAVIVQIAFYLHIQTYVYRRPAVLSRPLIFATAFMSFFSVVIALFKDI
PDIVGDKIFGIQSFTVRLGQEKVFWICISLLEMAYLVAIVVGATSSNIWSKYFTVVGHAA
LALLLWTRAKSIDFSRKAAITSFYMFIWKLFYAEYLLIPLVR

Transcript Sequence

Gene sequence data has not been registered.